STUDY
We provide the possibility of studying cyanobacteria and algae within the bachelor's, master's and doctoral studies.
We participate in teaching the topic of cyanobacteria and algae in basic subjects:
Phycology
Field Work I for students of the first year of bachelor's study,
Introductory botany, phycology and mycology
Biological Laboratory Techniques
We teach specialized courses for students focused on phycology:
Advanced Phycology Seminar
Algal Culturing Techniques
Basic phycological methods
Introduction to Ecology of Algae and Cyanobacteria
Biogeography of protistian organisms
Practical Determination of Algae and Cyanobacteria
Biotechnologies of algae and cyanobacteria
Towards a unified approach of classification for Cyanobacteria: Integrating genomic and polyphasic criteria for a modern taxonomy
Since 2000, criteria for recognition of cyanobacterial genera and species utilizing the polyphasic approach have been developed and tested. A separate taxonomic approach based on genomes has recently been proposed but not integrated into existing taxonomy. We will compare these disparate approaches by collecting complementary data within the model group, Synechococcales, the best studied group in terms of both genomes assembled and recent polyphasic taxonomic effort. This will allow direct comparison in order to integrate both approaches, evaluate taxonomic boundaries, and derive taxonomic concepts for cyanobacteria that will satisfy and be workable for all researchers. We will initiate the revision of families (esp. family Ocullatelaceae) and orders in Synechococcales, and formulate recommendations for standard practice for future phylum-wide taxonomic revision.
Contact: doc. RNDR. Jan Kaštovský, Ph.D., hanys_at_prf.jcu.cz
Evolution, taxonomy & biogeography of photosynthetic euglenoids
The main topics for the research should be a taxonomy (cryptic diversity, phylogenetic relationships, taxonomical revisions) and diversity (role in bioindication, aplication of modern taxonomy to ecology, effect of the environment on species as one of promotors of the biodiversity) of the euglenoids, marginally also biogeography (distribution patterns, endemism vs. ubiquity, vectors of spreading). As a tool to solve these research questions, a combination of methods and comparison of all important and usable criteria (so-called polyphasic approach), leading to the recognition of genetic, ecological and/or morphological entities in various environmental situations will be used.
Contact: Mgr. Josef Juráň, Ph.D., juranj00_at_prf.jcu.cz
Offer
PhD study for 4 years 2022-2026,
professional career development in science & soft skills,
participation in cutting-edge research projects,
access to research infrastructure & equipment,
international collaboration & visibility, international short-term research visits,
English speaking, stimulating and friendly environment,
administration support with relocation & settlement in the Czech Republic,
participation in annual PhD retreat,
meals allowance, student benefits,
work-life balance in a middle-sized university city offering options for outdoor, sport & cultural activities.
Requirements
MSc in Phycology, Microbiology, Molecular Biology or similar,
proficiency in English – oral and written,
openness to learn new techniques, active attitude to problem-solving,
ability to work in a team,
independent thinking & passion for science.
Please submit your structured CV including list of publications, motivation letter, name & contacts of two academic referees via e-mail by 31th December 2021. For euglenoids it is necessary to process overview of your research (download here).
Interviews with selected applicants will be held in the first third of 2022.